PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3DL_678D51EAD.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 68aa    MW: 7826.82 Da    PI: 10.5709
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3DL_678D51EAD.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY56.65e-183068136
                           ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EE CS
                   WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkk 36
                           ldDg++WrKYGqK++ g+++pr+Y+rCt++   gC + k
  Traes_3DL_678D51EAD.1 30 LDDGFSWRKYGQKDILGAKYPRAYFRCTHRhtqGCYASK 68
                           59***************************9888898876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.7E-181768IPR003657WRKY domain
SuperFamilySSF1182901.1E-162468IPR003657WRKY domain
PROSITE profilePS5081116.882568IPR003657WRKY domain
SMARTSM007746.6E-123068IPR003657WRKY domain
PfamPF031065.4E-153168IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    Send to blast
HAAGQSKKRK TQPKWSTQVR VNSVEDVGPL DDGFSWRKYG QKDILGAKYP RAYFRCTHRH  60
TQGCYASK
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8274017e-96KR827401.1 Triticum aestivum WRKY50 transcriptional factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006664979.11e-37PREDICTED: probable WRKY transcription factor 41
SwissprotQ9SUP66e-25WRK53_ARATH; Probable WRKY transcription factor 53
TrEMBLA0A0M3Q8N62e-44A0A0M3Q8N6_WHEAT; WRKY50 transcriptional factor
TrEMBLW5DAK92e-45W5DAK9_WHEAT; Uncharacterized protein
STRINGMLOC_44455.17e-42(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.14e-26WRKY family protein
Publications ? help Back to Top
  1. Wang X, et al.
    Expression of TaWRKY44, a wheat WRKY gene, in transgenic tobacco confers multiple abiotic stress tolerances.
    Front Plant Sci, 2015. 6: p. 615
    [PMID:26322057]